The generatorConfigurations give you the flexibility to overwrite any kind of wrapper.conf entry to your needs.
<project>
...
<build>
<plugins>
<plugin>
...
<configuration>
<daemons>
<daemon>
<id>daemon-1</id>
<mainClass>org.codehaus.mojo.appassembler.example.helloworld.HelloWorld</mainClass>
<commandLineArguments>
<commandLineArgument>start</commandLineArgument>
</commandLineArguments>
<platforms>
<platform>jsw</platform>
</platforms>
<generatorConfigurations>
<generatorConfiguration>
<generator>jsw</generator>
<includes>
<include>linux-x86-32</include>
<include>linux-x86-64</include>
</includes>
<configuration>
<property>
<name>configuration.directory.in.classpath.first</name>
<value>etc</value>
</property>
<property>
<name>set.default.REPO_DIR</name>
<value>lib</value>
</property>
<property>
<name>wrapper.logfile</name>
<value>logs/wrapper.log</value>
</property>
<property>
<name>run.as.user.envvar</name>
<value>johndoe</value>
</property>
</configuration>
</generatorConfiguration>
</generatorConfigurations>
</daemon>
</daemons>
</configuration>
</plugin>
</plugins>
</build>
</project>Based on the above configuration the entries like set.default.REPO_DIR, wrapper.logfile or configuration.directory.in.classpath.first have been overwritten with their defined values or being added to the configuration.
. # Java Application wrapper.java.command=java wrapper.working.dir=.. # Java Main class. This class must implement the WrapperListener interface # or guarantee that the WrapperManager class is initialized. Helper # classes are provided to do this for you. See the Integration section # of the documentation for details. wrapper.java.mainclass=org.tanukisoftware.wrapper.WrapperSimpleApp set.default.REPO_DIR=lib set.default.APP_BASE=. # Java Classpath (include wrapper.jar) Add class path elements as # needed starting from 1 wrapper.java.classpath.1=lib/wrapper.jar wrapper.java.classpath.2=etc wrapper.java.classpath.3=%REPO_DIR%/daemonRepositoryLayout-test-1.0-SNAPSHOT.jar # Java Library Path (location of Wrapper.DLL or libwrapper.so) wrapper.java.library.path.1=lib # Java Additional Parameters #wrapper.java.additional.1= wrapper.java.additional.1=-Djava.security.policy=conf/policy.all wrapper.java.additional.2=-Dcom.sun.management.jmxremote wrapper.java.additional.3=-Dcom.sun.management.jmxremote.port=8999 wrapper.java.additional.4=-Dcom.sun.management.jmxremote.authenticate=false wrapper.java.additional.5=-Dcom.sun.management.jmxremote.ssl=false wrapper.java.additional.6=-server # Initial Java Heap Size (in MB) #wrapper.java.initmemory=3 wrapper.java.initmemory=256M # Maximum Java Heap Size (in MB) #wrapper.java.maxmemory=64 wrapper.java.maxmemory=1024M # Application parameters. Add parameters as needed starting from 1 wrapper.app.parameter.1=org.codehaus.mojo.appassembler.example.helloworld.HelloWorld wrapper.app.parameter.2=start . # Format of output for the console. (See docs for formats) wrapper.console.format=PM # Log Level for console output. (See docs for log levels) wrapper.console.loglevel=INFO # Log file to use for wrapper output logging. wrapper.logfile=logs/wrapper.log # Format of output for the log file. (See docs for formats) wrapper.logfile.format=LPTM # Log Level for log file output. (See docs for log levels) wrapper.logfile.loglevel=INFO # Maximum size that the log file will be allowed to grow to before # the log is rolled. Size is specified in bytes. The default value # of 0, disables log rolling. May abbreviate with the 'k' (kb) or # 'm' (mb) suffix. For example: 10m = 10 megabytes. wrapper.logfile.maxsize=0 # Maximum number of rolled log files which will be allowed before old # files are deleted. The default value of 0 implies no limit. wrapper.logfile.maxfiles=0 # Log Level for sys/event log output. (See docs for log levels) wrapper.syslog.loglevel=NONE . # Title to use when running as a console wrapper.console.title=appassembler-maven-plugin daemonRepositoryLayout-test . # WARNING - Do not modify any of these properties when an application # using this configuration file has been installed as a service. # Please uninstall the service before modifying this section. The # service can then be reinstalled. # Name of the service wrapper.ntservice.name=daemon-1 # Display name of the service wrapper.ntservice.displayname=appassembler-maven-plugin daemonRepositoryLayout-test # Description of the service wrapper.ntservice.description=appassembler-maven-plugin daemonRepositoryLayout-test # Service dependencies. Add dependencies as needed starting from 1 wrapper.ntservice.dependency.1= # Mode in which the service is installed. AUTO_START or DEMAND_START wrapper.ntservice.starttype=AUTO_START # Allow the service to interact with the desktop. wrapper.ntservice.interactive=false configuration.directory.in.classpath.first=etc